MolNFT v1 · #176309 · protein + RNA

Mycoplasma genitalium RNase R in complex with single-stranded RNA

7DIC: “Mycoplasma genitalium RNase R in complex with single-stranded RNA”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #176309 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7DIC
Type: protein + RNA
Length: 655 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P47350
Ligands: MG

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	646	—	P47350
C	—	rna	9	—	—

Ligands and binding sites

MG · Magnesium ion · metal · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7DIC · Mycoplasma genitalium RNase R in complex with single-stranded RNA · the same entry in another collection · chain A against A, TM-score 1.00
P47350 · AlphaFold monomer V2.0 prediction for ribonuclease R (P47350) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P47350
Elsewhere: RCSB PDB 7DIC · PDBe 7DIC · UniProt P47350

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