MolNFT v1 · #176303 · protein
Crystal structure of the rationally designed MKDPBB_SYM_86 protein
7DI1: “Crystal structure of the rationally designed MKDPBB_SYM_86 protein”. X-ray diffraction. MolNFT v1 #176303 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DI1
- Type
- protein
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MKDPBB_SYM_86 protein
Structure
x-ray diffraction · 1 distinct chain · 21% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | MKDPBB_SYM_86 protein | protein | 92 | 21% helix, 37% strand | — |
Ligands and binding sites
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 465 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7DI1 · Crystal structure of the rationally designed mkDPBB_sym_86 protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7DI1 · PDBe 7DI1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.