MolNFT v1 · #176139 · protein + DNA
Crystal structure of HSF1 DNA-binding domain in complex with 3-site hse DNA (23 bp)
7DCS: “Crystal structure of HSF1 DNA-binding domain in complex with 3-site hse DNA (23 bp)”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #176139 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DCS
- Type
- protein + DNA
- Length
- 676 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q00613
- Ligands
- NA
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 95 | — | Q00613 |
| B | — | protein | 102 | — | Q00613 |
| C | — | protein | 94 | — | Q00613 |
| D | — | protein | 95 | — | Q00613 |
| E | — | protein | 105 | — | Q00613 |
| F | — | protein | 93 | — | Q00613 |
| G, I | — | dna | 23 | — | — |
| H, J | — | dna | 23 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · 5 copies · chains A, B, C, D, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DCS · Crystal structure of HSF1 DNA-binding domain in complex with 3-site HSE DNA (23 bp) · the same entry in another collection · chain J against J, TM-score 1.00
- Q00613 · AlphaFold monomer V2.0 prediction for heat shock factor protein 1 (Q00613) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00613
- Elsewhere: RCSB PDB 7DCS · PDBe 7DCS · UniProt Q00613
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