MolNFT v1 · #176134 · protein

Crystal structure of citx

7DCM · Probable apo-citrate lyase phosphoribosyl-dephospho-CoA…: “Crystal structure of citx”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.60). MolNFT v1 #176134 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 7DCM
Type: protein
Length: 182 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
EC: 2.7.7.61
UniProt: C3TJT2
Ligands: ZN
Pockets: 1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61)	protein	182	47% helix, 20% strand	C3TJT2

Ligands and binding sites

ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	450	0.60	0.75	40	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

7DCM · Crystal structure of CITX · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C3TJT2
Elsewhere: RCSB PDB 7DCM · PDBe 7DCM · UniProt C3TJT2

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