MolNFT v1 · #175985 · RNA
Crystal structure of the DOMAIN2 of NAD+ riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in MN2+
7D82: “Crystal structure of the DOMAIN2 of NAD+ riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in…”. X-ray diffraction, 3 ligands (NAD, MN, MG). MolNFT v1 #175985 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7D82
- Type
- RNA
- Length
- 50 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAD, MN, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 50 | — | — |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · chains A
- MN · Manganese (II) ion · metal · 7 copies · chains A
- MG · Magnesium ion · metal · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7D82 · Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7D82 · PDBe 7D82
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