MolNFT v1 · #175949 · protein
X-ray structure of the intermolecular complex of clostridium perfringens sortase C with the C-terminal cell wall sorting signal motif.
7D6P · Sortase family protein: “X-ray structure of the intermolecular complex of clostridium perfringens sortase C with the C-terminal cell…”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.43). MolNFT v1 #175949 on…
- PDB
- 7D6P
- Type
- protein
- Length
- 198 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sortase family protein
- UniProt
- Q0SWL7
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 24% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sortase family protein | protein | 198 | 24% helix, 30% strand | Q0SWL7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 123 | 0.43 | 0.76 | 17 | empty |
Compared structures
- 7D6P · X-ray structure of the intermolecular complex of Clostridium perfringens sortase C with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0SWL7
- Elsewhere: RCSB PDB 7D6P · PDBe 7D6P · UniProt Q0SWL7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.