MolNFT v1 · #175947 · protein
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
7D6N: “Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase”. X-ray diffraction, 2 ligands (ZN, MG). MolNFT v1 #175947 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7D6N
- Type
- protein
- Length
- 5,858 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- K4P8A2
- Ligands
- ZN, MG
Structure
x-ray diffraction · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 588 | — | K4P8A2 |
| B | — | protein | 584 | — | K4P8A2 |
| E | — | protein | 588 | — | K4P8A2 |
| D | — | protein | 589 | — | K4P8A2 |
| C | — | protein | 586 | — | K4P8A2 |
| F | — | protein | 583 | — | K4P8A2 |
| G | — | protein | 584 | — | K4P8A2 |
| J | — | protein | 582 | — | K4P8A2 |
| I | — | protein | 586 | — | K4P8A2 |
| H | — | protein | 588 | — | K4P8A2 |
Ligands and binding sites
- ZN · Zinc ion · metal · 20 copies · chains A, B, E, D, C, F, G, J, I, H
- MG · Magnesium ion · metal · 10 copies · chains A, B, E, D, C, F, G, J, I, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7D6N · Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K4P8A2
- Elsewhere: RCSB PDB 7D6N · PDBe 7D6N · UniProt K4P8A2
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