MolNFT v1 · #175932 · protein
Crystal structure of retroviral protease-like domain of DDI1 from toxoplasma gondii
7D66: “Crystal structure of retroviral protease-like domain of DDI1 from toxoplasma gondii”. X-ray diffraction. MolNFT v1 #175932 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7D66
- Type
- protein
- Length
- 1,454 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- S7W9N7
Structure
x-ray diffraction · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 120 | — | S7W9N7 |
| A, D, I | — | protein | 124 | — | S7W9N7 |
| C | — | protein | 126 | — | S7W9N7 |
| F | — | protein | 121 | — | S7W9N7 |
| E | — | protein | 110 | — | S7W9N7 |
| H | — | protein | 119 | — | S7W9N7 |
| G | — | protein | 120 | — | S7W9N7 |
| J | — | protein | 120 | — | S7W9N7 |
| L | — | protein | 123 | — | S7W9N7 |
| K | — | protein | 123 | — | S7W9N7 |
Ligands and binding sites
- GOL · Glycerol · additive · 16 copies · chains B, F, I, A, E, H, J, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7D66 · Crystal structure of retroviral protease-like domain of Ddi1 from Toxoplasma gondii · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt S7W9N7
- Elsewhere: RCSB PDB 7D66 · PDBe 7D66 · UniProt S7W9N7
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