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MolNFT v1 · #175931 · protein

Cryo-EM structure of human CALHM5 in the presence of CA2+

7D65: “Cryo-EM structure of human CALHM5 in the presence of CA2+”. Electron microscopy, 1 ligand (PA8). MolNFT v1 #175931 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7D65
Type
protein
Length
3,168 residues
Chains
11
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q8N5C1
Ligands
PA8

Structure

electron microscopy · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D, E, F, G, H, I, J, K—protein288—Q8N5C1

Ligands and binding sites

  • PA8 · 1,2-dioctanoyl-sn-glycero-3-phosphate · ligand · 55 copies · chains A, B, C, D, E, F, G, H, I, J, K

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7D65 · Cryo-EM Structure of human CALHM5 in the presence of Ca2+ · the same entry in another collection · chain K against K, TM-score 1.00
  • Q8N5C1 · AlphaFold monomer V2.0 prediction for calcium homeostasis modulator protein 5 (Q8N5C1) · a predicted model of the same protein · chain A against A, TM-score 0.99

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