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MolNFT v1 · #175922 · protein

Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3)

7D5V: “Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3)”. X-ray diffraction. MolNFT v1 #175922 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7D5V
Type
protein
Length
1,240 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9ULW8

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein620—Q9ULW8

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · 25 copies · chains A, B
  • GOL · Glycerol · additive · 8 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7D5V · Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3) · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9ULW8 · AlphaFold monomer V2.0 prediction for protein-arginine deiminase type-3 (Q9ULW8) · a predicted model of the same protein · chain A against A, TM-score 0.93

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