MolNFT v1 · #17578 · protein
Crystal structure of glcv, the ABC-ATPase of the glucose ABC transporter from sulfolobus solfataricus
1OXT · ABC transporter, ATP binding protein: “Crystal structure of glcv, the ABC-ATPase of the glucose ABC transporter from sulfolobus solfataricus”. X-ray diffraction, 7 pockets (best druggability 0.63). MolNFT v1 #17578 on GenesisL1: 3D…
- PDB
- 1OXT
- Type
- protein
- Length
- 1,056 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ABC transporter, ATP binding protein
- UniProt
- Q97UY8
- Pockets
- 7 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D | ABC transporter, ATP binding protein | protein | 352 | 28% helix, 36% strand | Q97UY8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.63 | 0.93 | 14 | empty |
| 2 | 210 | 0.50 | 0.76 | 26 | empty |
| 3 | 187 | 0.47 | 0.75 | 24 | empty |
| 4 | 184 | 0.47 | 0.75 | 23 | empty |
| 5 | 189 | 0.47 | 0.75 | 25 | empty |
Interfaces
2 interfaces between chains.
- A–B · 336 Ų buried · 5 hydrogen bonds · protein-protein
- B–D · 208 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 1OXT · Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus… · the same entry in another collection · chain A against A, TM-score 1.00
- Q97UY8 · AlphaFold monomer V2.0 prediction for glucose import ATP-binding protein glcv (Q97UY8) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q97UY8
- Elsewhere: RCSB PDB 1OXT · PDBe 1OXT · UniProt Q97UY8
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