MolNFT v1 · #175730 · protein
S protein of SARS-cov-2 in complex bound with P5A-2G7
7CZW: “S protein of SARS-cov-2 in complex bound with P5A-2G7”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #175730 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CZW
- Type
- protein
- Length
- 3,880 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2, A0A0C4DH41, V9HW68, A0A5C2G2G8, Q6IPQ0
- Ligands
- NAG
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1006 | — | P0DTC2 |
| B | — | protein | 982 | — | P0DTC2 |
| C | — | protein | 1004 | — | P0DTC2 |
| H, J | — | protein | 230 | — | A0A0C4DH41, V9HW68 |
| L, N | — | protein | 214 | — | A0A5C2G2G8, Q6IPQ0 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 70 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CZW · S protein of SARS-CoV-2 in complex bound with P5A-2G7 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Every structure of UniProt A0A0C4DH41
- Every structure of UniProt V9HW68
- Every structure of UniProt A0A5C2G2G8
- Every structure of UniProt Q6IPQ0
- Elsewhere: RCSB PDB 7CZW · PDBe 7CZW · UniProt P0DTC2 · UniProt A0A0C4DH41 · UniProt V9HW68 · UniProt A0A5C2G2G8 · UniProt Q6IPQ0
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