MolNFT v1 · #175220 · protein
Crystal structure of a periplasmic sensor domain of histidine kinase vbrk
7CJR: “Crystal structure of a periplasmic sensor domain of histidine kinase vbrk”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.33). MolNFT v1 #175220 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CJR
- Type
- protein
- Length
- 214 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Histidine kinase
- EC
- 2.7.13.3
- UniProt
- A0A0L8SC43
- Ligands
- CL
- Pockets
- 1 · best druggability 0.33
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histidine kinase (EC 2.7.13.3) | protein | 214 | 50% helix, 15% strand | A0A0L8SC43 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.33 | 0.77 | 14 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7CJR · Crystal structure of a periplasmic sensor domain of histidine kinase VbrK · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0L8SC43
- Elsewhere: RCSB PDB 7CJR · PDBe 7CJR · UniProt A0A0L8SC43
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.