MolNFT v1 · #175075 · protein
Crystal structure of housekeeping sortase srta from lactobacillus rhamnosus gg
7CFJ · Class a sortase: “Crystal structure of housekeeping sortase srta from lactobacillus rhamnosus gg”. X-ray diffraction, 3 pockets (best druggability 0.44). MolNFT v1 #175075 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7CFJ
- Type
- protein
- Length
- 288 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Class a sortase
- UniProt
- A0A0E3D3H8
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Class a sortase | protein | 144 | 15% helix, 43% strand | A0A0E3D3H8 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 122 | 0.44 | 0.77 | 19 | empty |
| 2 | 113 | 0.40 | 0.75 | 21 | empty |
| 3 | 75 | 0.30 | 0.73 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 558 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7CFJ · Crystal structure of housekeeping sortase SrtA from Lactobacillus rhamnosus GG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E3D3H8
- Elsewhere: RCSB PDB 7CFJ · PDBe 7CFJ · UniProt A0A0E3D3H8
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