MolNFT v1 · #175063 · protein
Crystal structure of beta-aspartyl dipeptidase from thermophilic keratin degrading fervidobacterium islandicum aw-1 in complex with beta-asp-leu dipeptide
7CF6: “Crystal structure of beta-aspartyl dipeptidase from thermophilic keratin degrading fervidobacterium…”. X-ray diffraction, 2 ligands (FWO, ZN). MolNFT v1 #175063 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CF6
- Type
- protein
- Length
- 1,497 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1B0VPV0
- Ligands
- FWO, ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 372 | — | A0A1B0VPV0 |
| A | — | protein | 384 | — | A0A1B0VPV0 |
| C | — | protein | 371 | — | A0A1B0VPV0 |
| D | — | protein | 370 | — | A0A1B0VPV0 |
Ligands and binding sites
- FWO · (2S)-2-[[(3S)-3-azanyl-4-oxidanyl-4-oxidanylidene-butanoyl]amino]-4-methyl-pentanoic acid · ligand · 4 copies · chains B, A, C, D
- ZN · Zinc ion · metal · 8 copies · chains B, A, C, D
- GOL · Glycerol · additive · 11 copies · chains B, A, C, D
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CF6 · Crystal structure of Beta-aspartyl dipeptidase from thermophilic keratin degrading… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1B0VPV0
- Elsewhere: RCSB PDB 7CF6 · PDBe 7CF6 · UniProt A0A1B0VPV0
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