MolNFT v1 · #175000 · protein
Crystal structure of the S103F mutant of bacillus subtilis (natto) yabj protein.
7CD3: “Crystal structure of the S103F mutant of bacillus subtilis (natto) yabj protein.”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #175000 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CD3
- Type
- protein
- Length
- 573 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D4G3D4
- Ligands
- SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 108 | — | D4G3D4 |
| B | — | protein | 107 | — | D4G3D4 |
| C, D | — | protein | 124 | — | D4G3D4 |
| E | — | protein | 110 | — | D4G3D4 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 10 copies · chains A, D, B, C, E
- GOL · Glycerol · additive · 14 copies · chains A, C, D, B, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CD3 · Crystal structure of the S103F mutant of Bacillus subtilis (natto) YabJ protein. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D4G3D4
- Elsewhere: RCSB PDB 7CD3 · PDBe 7CD3 · UniProt D4G3D4
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