MolNFT v1 · #174912 · protein
Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state
7CAG: “Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state”. Electron microscopy, 3 ligands (ATP, GLC, MG). MolNFT v1 #174912 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CAG
- Type
- protein
- Length
- 1,717 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0R2C3, I7G6S2, A0R2C1, A0R2C0
- Ligands
- ATP, GLC, MG
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 435 | — | A0R2C3 |
| A | — | protein | 285 | — | I7G6S2 |
| B | — | protein | 273 | — | A0R2C1 |
| C, D | — | protein | 362 | — | A0R2C0 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains C, D
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CAG · Mycobacterium smegmatis LpqY-SugABC complex in the catalytic intermediate state · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0R2C3
- Every structure of UniProt I7G6S2
- Every structure of UniProt A0R2C1
- Every structure of UniProt A0R2C0
- Elsewhere: RCSB PDB 7CAG · PDBe 7CAG · UniProt A0R2C3 · UniProt I7G6S2 · UniProt A0R2C1 · UniProt A0R2C0
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