MolNFT v1 · #174762 · protein

Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with bicarbonate

7C5V: “Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with bicarbonate”. X-ray diffraction, 1 ligand (BCT), 1 pocket (best druggability 0.28). MolNFT v1 #174762 on GenesisL1: 3D structure, binding sites and…

PDB: 7C5V
Type: protein
Length: 327 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Iota-carbonic anhydrase
UniProt: Q8YT18
Ligands: BCT
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 2 distinct chains · 35% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Iota-carbonic anhydrase	protein	164	35% helix, 30% strand	Q8YT18
B	Iota-carbonic anhydrase	protein	163	34% helix, 31% strand	Q8YT18

Ligands and binding sites

BCT · Bicarbonate ion · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.28	0.74	14	empty

Interfaces

1 interface between chains.

A–B · 1403 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

7C5V · Crystal structure of the iota-carbonic anhydrase from cyanobacterium complexed with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8YT18
Elsewhere: RCSB PDB 7C5V · PDBe 7C5V · UniProt Q8YT18

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