MolNFT v1 · #17470 · protein
Structure of the aaa+ protease delivery protein sspb
1OUL · Stringent starvation protein B homolog: “Structure of the aaa+ protease delivery protein sspb”. X-ray diffraction, 2 pockets (best druggability 0.50). MolNFT v1 #17470 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1OUL
- Type
- protein
- Length
- 243 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Stringent starvation protein B homolog
- UniProt
- P45206
- Pockets
- 2 · best druggability 0.50
Structure
x-ray diffraction · 2 distinct chains · 19% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Stringent starvation protein B homolog | protein | 122 | 20% helix, 34% strand | P45206 |
| B | Stringent starvation protein B homolog | protein | 121 | 17% helix, 33% strand | P45206 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 164 | 0.50 | 0.77 | 25 | empty |
| 2 | 65 | 0.30 | 0.74 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 673 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 1OUL · Structure of the AAA+ protease delivery protein SspB · the same entry in another collection · chain A against A, TM-score 1.00
- P45206 · AlphaFold monomer V2.0 prediction for stringent starvation protein B homolog (P45206) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45206
- Elsewhere: RCSB PDB 1OUL · PDBe 1OUL · UniProt P45206
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