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MolNFT v1 · #174607 · protein

Crystal structure of a dinucleotide-binding protein (S127A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine

7C0U: “Crystal structure of a dinucleotide-binding protein (S127A) of ABC transporter endogenously bound to…”. X-ray diffraction, 2 ligands (FGO, CL). MolNFT v1 #174607 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7C0U
Type
protein
Length
794 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q5SLB4
Ligands
FGO, CL

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein397—Q5SLB4

Ligands and binding sites

  • FGO · [(1s,3r,3ar,6as)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3A,4,6,6A-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R, 5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate · ligand · 2 copies · chains A, B
  • CL · Chloride ion · ion · 3 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · 4 copies · chains A, B
  • GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7C0U · Crystal structure of a dinucleotide-binding protein (S127A) of ABC transporter… · the same entry in another collection · chain A against A, TM-score 1.00

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