MolNFT v1 · #174525 · protein
Plasmodium vivax cytoplasmic phenylalanyl-tRNA synthetase in complex with BRD1389
7BY6: “Plasmodium vivax cytoplasmic phenylalanyl-tRNA synthetase in complex with BRD1389”. X-ray diffraction, 2 ligands (FB9, MG). MolNFT v1 #174525 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BY6
- Type
- protein
- Length
- 905 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A5K9S0, A5K464
- Ligands
- FB9, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 299 | — | A5K9S0 |
| B | — | protein | 606 | — | A5K464 |
Ligands and binding sites
- FB9 · (3S,4R,8R,9R,10S)-N-(4-cyclopropyloxyphenyl)-10-(methoxymethyl)-3,4-bis(oxidanyl)-9-[4-(2-phenylethynyl)phenyl]-1,6-diazabicyclo[6.2.0]decane-6-carboxamide · ligand · chains A
- MG · Magnesium ion · metal · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BY6 · Plasmodium vivax cytoplasmic Phenylalanyl-tRNA synthetase in complex with BRD1389 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5K9S0
- Every structure of UniProt A5K464
- Elsewhere: RCSB PDB 7BY6 · PDBe 7BY6 · UniProt A5K9S0 · UniProt A5K464
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