MolNFT v1 · #174506 · protein
Mavc-LPG2149 complex
7BXH: “Mavc-LPG2149 complex”. X-ray diffraction, 4 pockets (best druggability 0.68). MolNFT v1 #174506 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BXH
- Type
- protein
- Length
- 478 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- LPG2149; Mavc
- UniProt
- Q5ZTL2, Q5ZTL4
- Pockets
- 4 · best druggability 0.68
Structure
x-ray diffraction · 2 distinct chains · 53% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | LPG2149 | protein | 102 | 64% helix, 0% strand | Q5ZTL2 |
| B | Mavc | protein | 376 | 51% helix, 14% strand | Q5ZTL4 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 354 | 0.68 | 0.81 | 36 | empty |
| 2 | 81 | 0.33 | 0.74 | 13 | empty |
| 3 | 78 | 0.33 | 0.74 | 16 | empty |
| 4 | 53 | 0.29 | 0.75 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1276 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 7BXH · MavC-Lpg2149 complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZTL2
- Every structure of UniProt Q5ZTL4
- Elsewhere: RCSB PDB 7BXH · PDBe 7BXH · UniProt Q5ZTL2 · UniProt Q5ZTL4
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