MolNFT v1 · #174471 · protein
Bombyx mori GH32 beta-fructofuranosidase BMSUC1 mutant D63A in complex with sucrose
7BWC: “Bombyx mori GH32 beta-fructofuranosidase BMSUC1 mutant D63A in complex with sucrose”. X-ray diffraction, 2 ligands (GLC, FRU), 4 pockets (best druggability 0.52). MolNFT v1 #174471 on GenesisL1: 3D structure, binding sites and…
- PDB
- 7BWC
- Type
- protein
- Length
- 464 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-fructofuranosidase
- EC
- 3.2.1.26
- Ligands
- GLC, FRU
- Pockets
- 4 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-fructofuranosidase (EC 3.2.1.26) | protein | 464 | 6% helix, 52% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.52 | 0.81 | 19 | GLC, FRU |
| 2 | 122 | 0.45 | 0.78 | 22 | empty |
| 3 | 70 | 0.42 | 0.81 | 22 | empty |
| 4 | 52 | 0.40 | 0.81 | 17 | empty |
Compared structures
- 7BWC · Bombyx mori GH32 beta-fructofuranosidase BmSUC1 mutant D63A in complex with sucrose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7BWC · PDBe 7BWC
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