MolNFT v1 · #174275 · protein

Dimerization of SAV1 ww tandem

7BQF · Protein salvador homolog 1: “Dimerization of SAV1 ww tandem”. X-ray diffraction, 1 pocket (best druggability 0.28). MolNFT v1 #174275 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7BQF
Type: protein
Length: 84 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein salvador homolog 1
UniProt: Q8VEB2
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein salvador homolog 1	protein	84	0% helix, 29% strand	Q8VEB2

Ligands and binding sites

DIO · 1,4-diethylene dioxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.28	0.74	11	empty

Compared structures

7BQF · Dimerization of SAV1 WW tandem · the same entry in another collection · chain A against A, TM-score 1.00
Q8VEB2 · AlphaFold monomer V2.0 prediction for protein salvador homolog 1 (Q8VEB2) · a predicted model of the same protein · chain A against A, TM-score 0.51

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8VEB2
Elsewhere: RCSB PDB 7BQF · PDBe 7BQF · UniProt Q8VEB2

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