MolNFT v1 · #174244 · protein
Crystal structural analysis of swine dutpase
7BPD · Deoxyuridine triphosphatase: “Crystal structural analysis of swine dutpase”. X-ray diffraction, 2 pockets (best druggability 0.28). MolNFT v1 #174244 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BPD
- Type
- protein
- Length
- 264 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Deoxyuridine triphosphatase
- UniProt
- A0A4X1SHL3
- Pockets
- 2 · best druggability 0.28
Structure
x-ray diffraction · 1 distinct chain · 2% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Deoxyuridine triphosphatase | protein | 132 | 2% helix, 42% strand | A0A4X1SHL3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.28 | 0.71 | 18 | empty |
| 2 | 71 | 0.27 | 0.72 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 2127 Ų buried · 39 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7BPD · Crystal structural analysis of Swine dUTPase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4X1SHL3
- Elsewhere: RCSB PDB 7BPD · PDBe 7BPD · UniProt A0A4X1SHL3
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