MolNFT v1 · #174227 · protein

The structure of bacillus subtilis GLYCOSYLTRANSFERASE,BS-yjic

7BOV · Uncharacterized udp-glucosyltransferase yjic: “The structure of bacillus subtilis GLYCOSYLTRANSFERASE,BS-yjic”. X-ray diffraction, 1 ligand (NA), 3 pockets (best druggability 0.75). MolNFT v1 #174227 on GenesisL1: 3D structure…

PDB: 7BOV
Type: protein
Length: 357 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized udp-glucosyltransferase yjic
EC: 2.4.1.-
UniProt: O34539
Ligands: NA
Pockets: 3 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized udp-glucosyltransferase yjic (EC 2.4.1.-)	protein	357	41% helix, 15% strand	O34539

Ligands and binding sites

NA · Sodium ion · metal · chains A
GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	688	0.75	0.80	70	empty
2	152	0.70	0.89	32	empty
3	121	0.40	0.75	25	empty

Compared structures

7BOV · The Structure of Bacillus subtilis glycosyltransferase,Bs-YjiC · the same entry in another collection · chain A against A, TM-score 1.00
O34539 · AlphaFold monomer V2.0 prediction for uncharacterized udp- glucosyltransferase yjic… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O34539
Elsewhere: RCSB PDB 7BOV · PDBe 7BOV · UniProt O34539

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