MolNFT v1 · #174124 · protein
VPS26 dimer region of the fungal membrane-assembled RETROMER:GRD19 complex.
7BLQ: “VPS26 dimer region of the fungal membrane-assembled RETROMER:GRD19 complex.”. Electron microscopy, 1 ligand (PIB). MolNFT v1 #174124 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BLQ
- Type
- protein
- Length
- 1,426 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G0S709, G0S0X3, G0S0E6
- Ligands
- PIB
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, A | — | protein | 295 | — | G0S709 |
| G, L | — | protein | 116 | — | G0S0X3 |
| J, F | — | protein | 292 | — | G0S0E6 |
| V, U | — | protein | 10 | — | — |
Ligands and binding sites
- PIB · 2-(butanoyloxy)-1-{[(hydroxy{[2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl) oxy]methyl}ethyl butanoate · ligand · 2 copies · chains G, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BLQ · Vps26 dimer region of the fungal membrane-assembled retromer:Grd19 complex. · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S709
- Every structure of UniProt G0S0X3
- Every structure of UniProt G0S0E6
- Elsewhere: RCSB PDB 7BLQ · PDBe 7BLQ · UniProt G0S709 · UniProt G0S0X3 · UniProt G0S0E6
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