MolNFT v1 · #174119 · protein
Structure of susd homologue BT3013 from bacteroides thetaiotaomicron
7BLL: “Structure of susd homologue BT3013 from bacteroides thetaiotaomicron”. X-ray diffraction, 3 pockets (best druggability 0.68). MolNFT v1 #174119 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BLL
- Type
- protein
- Length
- 608 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Susd homolog
- UniProt
- Q8A3E1
- Pockets
- 3 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Susd homolog | protein | 608 | 39% helix, 9% strand | Q8A3E1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.68 | 0.87 | 38 | empty |
| 2 | 66 | 0.44 | 0.82 | 17 | PEG |
| 3 | 144 | 0.44 | 0.76 | 21 | empty |
Modifications
Observed in the structure: 17 modified (engineered).
Compared structures
- 7BLL · Structure of SusD homologue BT3013 from Bacteroides thetaiotaomicron · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A3E1
- Elsewhere: RCSB PDB 7BLL · PDBe 7BLL · UniProt Q8A3E1
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