MolNFT v1 · #173923 · protein
Crystal structure of SARS-cov-2 macrodomain in complex with remdesivir metabolite gs-441524
7BF6: “Crystal structure of SARS-cov-2 macrodomain in complex with remdesivir metabolite gs-441524”. X-ray diffraction, 1 ligand (U08). MolNFT v1 #173923 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BF6
- Type
- protein
- Length
- 507 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- U08
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 169 | — | P0DTD1 |
| B | — | protein | 171 | — | P0DTD1 |
| C | — | protein | 167 | — | P0DTD1 |
Ligands and binding sites
- U08 · (2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,1-F][1, 2,4]triazin-7-yl)-5-(hydroxymethyl)-3,4-bis(oxidanyl) oxolane-2-carbonitrile · ligand · 3 copies · chains A, B, C
- EDO · 1,2-ethanediol · additive · 5 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BF6 · Crystal structure of SARS-CoV-2 macrodomain in complex with remdesivir metabolite… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 7BF6 · PDBe 7BF6 · UniProt P0DTD1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.