MolNFT v1 · #173783 · protein
A hexameric barrel state of a de novo coiled-coil assembly: cc-TYPE2- (GGIAID)4
7BAT · Cc-TYPE2-(GGIAID)4: “A hexameric barrel state of a de novo coiled-coil assembly: cc-TYPE2- (GGIAID)4”. X-ray diffraction, 1 ligand (ACE). MolNFT v1 #173783 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BAT
- Type
- protein
- Length
- 87 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cc-TYPE2-(GGIAID)4
- Ligands
- ACE
Structure
x-ray diffraction · 3 distinct chains · 91% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cc-TYPE2-(GGIAID)4 | protein | 29 | 93% helix, 0% strand | — |
| B | Cc-TYPE2-(GGIAID)4 | protein | 30 | 87% helix, 0% strand | — |
| C | Cc-TYPE2-(GGIAID)4 | protein | 28 | 93% helix, 0% strand | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains A, C
- POL · N-propanol · additive · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
2 interfaces between chains.
- A–C · 667 Ų buried · 1 hydrogen bond · protein-protein
- A–B · 651 Ų buried · 1 hydrogen bond · protein-protein
Modifications
Observed in the structure: 2 covalent (covalent ligand).
Compared structures
- 7BAT · A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(GgIaId)4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7BAT · PDBe 7BAT
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