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MolNFT v1 · #173753 · protein

Structure of the FKBP51FK1 domain in complex with the macrocyclic safit analogue 35-(E)

7B9Z · Peptidyl-prolyl cis-trans isomerase FKBP5: “Structure of the FKBP51FK1 domain in complex with the macrocyclic safit analogue 35-(E)”. X-ray diffraction, 2 ligands (IS8, T58), 1 pocket (best druggability 0.51). MolNFT v1 #173753 on…

PDB
7B9Z
Type
protein
Length
128 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Peptidyl-prolyl cis-trans isomerase FKBP5
EC
5.2.1.8
UniProt
Q13451
Ligands
IS8, T58
Pockets
1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APeptidyl-prolyl cis-trans isomerase FKBP5 (EC 5.2.1.8)protein12816% helix, 35% strandQ13451

Ligands and binding sites

  • IS8 · isothiocyanate · ligand · 3 copies · chains A
  • T58 · 2-cyclohexyl-12-[2-(3,4-dimethoxyphenyl)ethyl]-25,26-dimethoxy-11,18,23-trioxa-4-azatetracyclo[22.3.1.113,17.04,9]nonacosa-1(27),13(29),14,16,20,24(28),25-heptaene-3,10-dione · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11420.510.7918T58

Compared structures

  • 7B9Z · Structure of the FKBP51FK1 domain in complex with the macrocyclic SAFit analogue 35-(E) · the same entry in another collection · chain A against A, TM-score 1.00
  • Q13451 · AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase FKBP5 (Q13451) · a predicted model of the same protein · chain A against A, TM-score 0.96

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