MolNFT v1 · #173696 · protein

ADPG2 - endopolygalacturonase from arabidopsis thaliana

7B8B: “ADPG2 - endopolygalacturonase from arabidopsis thaliana”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #173696 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7B8B
Type: protein
Length: 736 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8RY29
Ligands: PO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	369	—	Q8RY29
B	—	protein	367	—	Q8RY29

Ligands and binding sites

PO4 · Phosphate ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7B8B · ADPG2 - endopolygalacturonase from arabidopsis thaliana · the same entry in another collection · chain A against A, TM-score 1.00
Q8RY29 · AlphaFold monomer V2.0 prediction for polygalacturonase ADPG2 (Q8RY29) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8RY29
Elsewhere: RCSB PDB 7B8B · PDBe 7B8B · UniProt Q8RY29

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