MolNFT v1 · #173655 · protein
TRAPPC11 subunit (1-716)
7B6Z · Trafficking protein particle complex subunit 11: “TRAPPC11 subunit (1-716)”. Electron microscopy, 11 pockets (best druggability 0.78). MolNFT v1 #173655 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7B6Z
- Type
- protein
- Length
- 614 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Trafficking protein particle complex subunit 11
- UniProt
- Q8IRE3
- Pockets
- 11 · best druggability 0.78
Structure
electron microscopy · 1 distinct chain · 56% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trafficking protein particle complex subunit 11 | protein | 614 | 56% helix, 4% strand | Q8IRE3 |
Pockets
11 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 263 | 0.78 | 0.90 | 44 | empty |
| 2 | 82 | 0.71 | 0.95 | 24 | empty |
| 3 | 188 | 0.69 | 0.87 | 31 | empty |
| 4 | 108 | 0.63 | 0.88 | 22 | empty |
| 5 | 254 | 0.61 | 0.80 | 43 | empty |
Compared structures
- 7B6Z · TRAPPC11 subunit (1-716) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IRE3
- Elsewhere: RCSB PDB 7B6Z · PDBe 7B6Z · UniProt Q8IRE3
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