MolNFT v1 · #173499 · protein
Crystal structure of the ethyl-coenzyme M reductase from candidatus ethanoperedens thermophilum at 0.994-a resolution
7B1S: “Crystal structure of the ethyl-coenzyme M reductase from candidatus ethanoperedens thermophilum at 0.994-a…”. X-ray diffraction, 6 ligands (USN, COM, UUT). MolNFT v1 #173499 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7B1S
- Type
- protein
- Length
- 2,648 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- USN, COM, UUT, K, MN, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 592 | — | — |
| B, E | — | protein | 466 | — | — |
| C, F | — | protein | 265 | — | — |
| D | — | protein | 594 | — | — |
Ligands and binding sites
- USN · Dimethylated-F430 cofactor · ligand · 2 copies · chains A, B, C, D, E, F
- COM · 1-thioethanesulfonic acid · ligand · 2 copies · chains A, B, C, D, E, F
- UUT · (2S)-2-{[(2S)-2-{[(2S)-2-hydroxypropyl]oxy}propyl]oxy}propan-1-ol · ligand · 2 copies · chains C, F
- K · Potassium ion · metal · 4 copies · chains A, E, C, D
- MN · Manganese (II) ion · metal · chains A, D
- CL · Chloride ion · ion · 6 copies · chains B, C, E, F
- GOL · Glycerol · additive · 4 copies · chains A, D, E, C
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains B, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7B1S · Crystal structure of the ethyl-coenzyme M reductase from Candidatus Ethanoperedens… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7B1S · PDBe 7B1S
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