MolNFT v1 · #173431 · protein
DNA polymerase sliding clamp from escherichia COLI with peptide 38 bound
7AZL: “DNA polymerase sliding clamp from escherichia COLI with peptide 38 bound”. X-ray diffraction, 1 ligand (SJW). MolNFT v1 #173431 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AZL
- Type
- protein
- Length
- 1,461 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A073FMV0
- Ligands
- SJW
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 363 | — | A0A073FMV0 |
| B | — | protein | 358 | — | A0A073FMV0 |
| C | — | protein | 361 | — | A0A073FMV0 |
| D | — | protein | 359 | — | A0A073FMV0 |
| E, G, F, H | — | protein | 5 | — | — |
Ligands and binding sites
- SJW · 3-pyridin-3-ylpropanal · ligand · 4 copies · chains A, B, E, G, C, F, H, D
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains B, D
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7AZL · DNA polymerase sliding clamp from Escherichia coli with peptide 38 bound · the same entry in another collection · chain G against G, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A073FMV0
- Elsewhere: RCSB PDB 7AZL · PDBe 7AZL · UniProt A0A073FMV0
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