MolNFT v1 · #173430 · protein
DNA polymerase sliding clamp from escherichia COLI with peptide 35 bound
7AZK: “DNA polymerase sliding clamp from escherichia COLI with peptide 35 bound”. X-ray diffraction, 3 ligands (ACE, K, CL). MolNFT v1 #173430 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AZK
- Type
- protein
- Length
- 1,482 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A073FMV0
- Ligands
- ACE, K, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 368 | — | A0A073FMV0 |
| H, I, J, K | — | protein | 5 | — | — |
| B, C | — | protein | 365 | — | A0A073FMV0 |
| D | — | protein | 364 | — | A0A073FMV0 |
Ligands and binding sites
- ACE · Acetyl group · ligand · 4 copies · chains A, H, B, I, C, J, D, K
- K · Potassium ion · metal · 2 copies · chains A, C
- CL · Chloride ion · ion · 3 copies · chains A, B, D
- 1PE · Pentaethylene glycol · additive · 8 copies · chains A, B, C, D
- GOL · Glycerol · additive · 2 copies · chains A, C, B
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7AZK · DNA polymerase sliding clamp from Escherichia coli with peptide 35 bound · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A073FMV0
- Elsewhere: RCSB PDB 7AZK · PDBe 7AZK · UniProt A0A073FMV0
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