MolNFT v1 · #173386 · protein

Crystal structure of a shortened ipgc variant in complex with 3-amino- 5-(pyrrolidin-1-yl)-1H-pyrazole-4-carbonitrile

7AXY: “Crystal structure of a shortened ipgc variant in complex with 3-amino…”. X-ray diffraction, 3 ligands (E9Q, MG, CL). MolNFT v1 #173386 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7AXY
Type: protein
Length: 263 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0A2U4
Ligands: E9Q, MG, CL

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	127	—	P0A2U4
B	—	protein	136	—	P0A2U4

Ligands and binding sites

E9Q · 5-azanyl-3-pyrrolidin-1-yl-1~{H}-pyrazole-4-carbonitrile · ligand · chains A, B
MG · Magnesium ion · metal
CL · Chloride ion · ion · 2 copies · chains A, B
DMS · Dimethyl sulfoxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7AXY · Crystal structure of a shortened IpgC variant in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
P0A2U4 · AlphaFold monomer V2.0 prediction for chaperone protein ipgc (P0A2U4) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A2U4
Elsewhere: RCSB PDB 7AXY · PDBe 7AXY · UniProt P0A2U4

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