MolNFT v1 · #173296 · protein
Solution structure of the fluorogen-activating protein fast in complex with the ligand N871B
7AVA: “Solution structure of the fluorogen-activating protein fast in complex with the ligand N871B”. Solution nmr, 1 ligand (S1Q), 1 pocket (best druggability 0.58). MolNFT v1 #173296 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 7AVA
- Type
- protein
- Length
- 138 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fast
- Ligands
- S1Q
- Pockets
- 1 · best druggability 0.58
Structure
solution nmr · 1 distinct chain · 25% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fast | protein | 138 | 25% helix, 24% strand | — |
Ligands and binding sites
- S1Q · (5~{Z})-5-[(2-methoxy-4-oxidanyl-phenyl)methylidene]-3-methyl-2-[(~{E})-2-pyridin-4-ylethenyl]imidazol-4-one · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 169 | 0.58 | 0.81 | 29 | S1Q |
Compared structures
- 7AVA · Solution structure of the fluorogen-activating protein FAST in complex with the ligand… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7AVA · PDBe 7AVA
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