MolNFT v1 · #172882 · protein

Crystal structure of the de novo designed two-heme binding protein, 4D2

7AH0: “Crystal structure of the de novo designed two-heme binding protein, 4D2”. X-ray diffraction, 1 ligand (HEM), 1 pocket (best druggability 0.79). MolNFT v1 #172882 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7AH0
Type: protein
Length: 104 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 4D2
Ligands: HEM
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 81% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	4D2	protein	104	81% helix, 0% strand	—

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	616	0.79	0.85	51	HEM

Compared structures

7AH0 · Crystal structure of the de novo designed two-heme binding protein, 4D2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 7AH0 · PDBe 7AH0

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