MolNFT v1 · #172864 · protein
Crystal structure of sf kinase yihv from E. COLI in complex with amppnp-mg
7AGH: “Crystal structure of sf kinase yihv from E. COLI in complex with amppnp-mg”. X-ray diffraction, 2 ligands (ANP, MG). MolNFT v1 #172864 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AGH
- Type
- protein
- Length
- 1,182 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P32143
- Ligands
- ANP, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, D | — | protein | 296 | — | P32143 |
| A | — | protein | 295 | — | P32143 |
| B | — | protein | 295 | — | P32143 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 4 copies · chains C, D, A, B
- MG · Magnesium ion · metal · 3 copies · chains C, D, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7AGH · Crystal structure of SF kinase YihV from E. coli in complex with AMPPNP-Mg · the same entry in another collection · chain C against C, TM-score 1.00
- P32143 · AlphaFold monomer V2.0 prediction for sulfofructose kinase (P32143) · a predicted model of the same protein · chain C against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32143
- Elsewhere: RCSB PDB 7AGH · PDBe 7AGH · UniProt P32143
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