MolNFT v1 · #172856 · protein
Structure of the KAR9 protein
7AG9: “Structure of the KAR9 protein”. X-ray diffraction, 11 pockets (best druggability 0.68). MolNFT v1 #172856 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AG9
- Type
- protein
- Length
- 759 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- KAR9
- UniProt
- G0VE12
- Pockets
- 11 · best druggability 0.68
Structure
x-ray diffraction · 2 distinct chains · 83% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | KAR9 | protein | 375 | 84% helix, 0% strand | G0VE12 |
| B | KAR9 | protein | 384 | 82% helix, 0% strand | G0VE12 |
Pockets
11 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1051 | 0.68 | 0.73 | 89 | empty |
| 2 | 66 | 0.61 | 0.91 | 19 | empty |
| 3 | 133 | 0.61 | 0.85 | 29 | empty |
| 4 | 102 | 0.56 | 0.84 | 24 | empty |
| 5 | 55 | 0.51 | 0.87 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 1276 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 7AG9 · Structure of the Kar9 protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0VE12
- Elsewhere: RCSB PDB 7AG9 · PDBe 7AG9 · UniProt G0VE12
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