MolNFT v1 · #172836 · protein + RNA
Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)
7AFL: “Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S…”. Electron microscopy, 1 ligand (MG). MolNFT v1 #172836 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7AFL
- Type
- protein + RNA
- Length
- 2,541 residues
- Chains
- 14
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C3SR62, C3SR27, P02358, C3SR12, C3SR57, C3SQR7, C3SSQ7, C3SYP2, C3SQY7, C3SFP7, C3TRH7, C3SSP7, A0A0J3VRH1
- Ligands
- MG
Structure
electron microscopy · 14 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 1054 | — | — |
| D | — | protein | 205 | — | C3SR62 |
| E | — | protein | 156 | — | C3SR27 |
| F | — | protein | 106 | — | P02358 |
| H | — | protein | 129 | — | C3SR12 |
| K | — | protein | 117 | — | C3SR57 |
| L | — | protein | 123 | — | C3SQR7 |
| O | — | protein | 88 | — | C3SSQ7 |
| P | — | protein | 82 | — | C3SYP2 |
| Q | — | protein | 80 | — | C3SQY7 |
| R | — | protein | 65 | — | C3SFP7 |
| T | — | protein | 86 | — | C3TRH7 |
| V | — | protein | 99 | — | C3SSP7 |
| X | — | protein | 151 | — | A0A0J3VRH1 |
Ligands and binding sites
- MG · Magnesium ion · metal · 25 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7AFL · Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3SR62
- Every structure of UniProt C3SR27
- Every structure of UniProt P02358
- Every structure of UniProt C3SR12
- Every structure of UniProt C3SR57
- Every structure of UniProt C3SQR7
- Every structure of UniProt C3SSQ7
- Every structure of UniProt C3SYP2
- Every structure of UniProt C3SQY7
- Every structure of UniProt C3SFP7
- Every structure of UniProt C3TRH7
- Every structure of UniProt C3SSP7
- Every structure of UniProt A0A0J3VRH1
- Elsewhere: RCSB PDB 7AFL · PDBe 7AFL · UniProt C3SR62 · UniProt C3SR27 · UniProt P02358 · UniProt C3SR12 · UniProt C3SR57 · UniProt C3SQR7 · UniProt C3SSQ7 · UniProt C3SYP2 · UniProt C3SQY7 · UniProt C3SFP7 · UniProt C3TRH7 · UniProt C3SSP7 · UniProt A0A0J3VRH1
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