MolNFT v1 · #172790 · protein
Structure of the mycoplasma mib protein
7ADM · Putative immunoglobulin-blocking virulence protein: “Structure of the mycoplasma mib protein”. Electron microscopy, 5 pockets (best druggability 0.55). MolNFT v1 #172790 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ADM
- Type
- protein
- Length
- 614 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative immunoglobulin-blocking virulence protein
- UniProt
- A0A446C0S7
- Pockets
- 5 · best druggability 0.55
Structure
electron microscopy · 1 distinct chain · 27% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | Putative immunoglobulin-blocking virulence protein | protein | 614 | 27% helix, 17% strand | A0A446C0S7 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 261 | 0.55 | 0.77 | 41 | empty |
| 2 | 56 | 0.47 | 0.85 | 15 | empty |
| 3 | 174 | 0.44 | 0.75 | 26 | empty |
| 4 | 66 | 0.34 | 0.77 | 17 | empty |
| 5 | 67 | 0.32 | 0.75 | 12 | empty |
Compared structures
- 7ADM · Structure of the mycoplasma MIB protein · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A446C0S7
- Elsewhere: RCSB PDB 7ADM · PDBe 7ADM · UniProt A0A446C0S7
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