MolNFT v1 · #172788 · protein
Structure of the mycoplasma mib protein
7ADJ · Putative immunoglobulin-blocking virulence protein: “Structure of the mycoplasma mib protein”. Electron microscopy, 9 pockets (best druggability 0.71). MolNFT v1 #172788 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7ADJ
- Type
- protein
- Length
- 613 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative immunoglobulin-blocking virulence protein
- UniProt
- A0A446C0S7
- Pockets
- 9 · best druggability 0.71
Structure
electron microscopy · 1 distinct chain · 30% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative immunoglobulin-blocking virulence protein | protein | 613 | 30% helix, 17% strand | A0A446C0S7 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.71 | 0.97 | 18 | empty |
| 2 | 142 | 0.47 | 0.77 | 24 | empty |
| 3 | 170 | 0.46 | 0.76 | 24 | empty |
| 4 | 103 | 0.41 | 0.77 | 18 | empty |
| 5 | 57 | 0.40 | 0.81 | 16 | empty |
Compared structures
- 7ADJ · Structure of the mycoplasma MIB protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A446C0S7
- Elsewhere: RCSB PDB 7ADJ · PDBe 7ADJ · UniProt A0A446C0S7
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