MolNFT v1 · #172399 · protein

LDTMT2 with covalent adduct derived from N-thio-beta-lactam 1A

7A1C: “LDTMT2 with covalent adduct derived from N-thio-beta-lactam 1A”. X-ray diffraction. MolNFT v1 #172399 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7A1C
Type: protein
Length: 515 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: I6Y9J2

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	256	—	I6Y9J2
B	—	protein	259	—	I6Y9J2

Ligands and binding sites

DMS · Dimethyl sulfoxide · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7A1C · LdtMT2 with covalent adduct derived from N-Thio-beta-lactam 1a · the same entry in another collection · chain A against A, TM-score 1.00
I6Y9J2 · AlphaFold monomer V2.0 prediction for L,D-transpeptidase 2 (I6Y9J2) · a predicted model of the same protein · chain B against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt I6Y9J2
Elsewhere: RCSB PDB 7A1C · PDBe 7A1C · UniProt I6Y9J2

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