MolNFT v1 · #172368 · protein
X-ray structure of nika from escherichia COLI in complex with fe-6- ME2-bpmcn
7A0C: “X-ray structure of nika from escherichia COLI in complex with fe-6- ME2-bpmcn”. X-ray diffraction, 4 ligands (QTT, MG, FE). MolNFT v1 #172368 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7A0C
- Type
- protein
- Length
- 996 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P33590
- Ligands
- QTT, MG, FE, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 498 | — | P33590 |
| B | — | protein | 498 | — | P33590 |
Ligands and binding sites
- QTT · 2-[[(1~{S},2~{S})-2-[methyl-[(6-methylpyridin-2-yl) methyl]amino]cyclohexyl]-[(6-methylpyridin-2-yl) methyl]amino]ethanoic acid · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 5 copies · chains A, B
- FE · Fe (III) ion · metal · 2 copies
- CL · Chloride ion · ion · chains B
- ACT · Acetate ion · additive · 9 copies · chains A, B
- GOL · Glycerol · additive · 9 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7A0C · X-ray structure of NikA from Escherichia coli in complex with Fe-6-Me2-BPMCN · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33590
- Elsewhere: RCSB PDB 7A0C · PDBe 7A0C · UniProt P33590
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