MolNFT v1 · #172232 · protein
Connectase MJ0548 from methanocaldococcus jannaschii in complex with an mtra-derived peptide
6ZW0: “Connectase MJ0548 from methanocaldococcus jannaschii in complex with an mtra-derived peptide”. X-ray diffraction, 1 ligand (QRE). MolNFT v1 #172232 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZW0
- Type
- protein
- Length
- 650 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q57968, Q58261
- Ligands
- QRE
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 299 | — | Q57968 |
| C, D | — | protein | 26 | — | Q58261 |
Ligands and binding sites
- QRE · 2-[3,6-bis(oxidanyl)-9~{H}-xanthen-9-yl]-5-[(6-oxidanyl-6-oxidanylidene-hexyl) carbamothioylamino]benzoic acid · ligand · 2 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZW0 · Connectase MJ0548 from Methanocaldococcus jannaschii in complex with an MtrA-derived… · the same entry in another collection · chain A against A, TM-score 1.00
- Q57968 · AlphaFold monomer V2.0 prediction for uncharacterized protein MJ0548 (Q57968) · a predicted model of the same protein · chain A against A, TM-score 0.89
- Q58261 · AlphaFold monomer V2.0 prediction for tetrahydromethanopterin S-methyltransferase subunit… · a predicted model of the same protein · chain C against A, TM-score 0.32
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q57968
- Every structure of UniProt Q58261
- Elsewhere: RCSB PDB 6ZW0 · PDBe 6ZW0 · UniProt Q57968 · UniProt Q58261
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