GL1X · GenesisL1 explorer

MolNFT v1 · #172232 · protein

Connectase MJ0548 from methanocaldococcus jannaschii in complex with an mtra-derived peptide

6ZW0: “Connectase MJ0548 from methanocaldococcus jannaschii in complex with an mtra-derived peptide”. X-ray diffraction, 1 ligand (QRE). MolNFT v1 #172232 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6ZW0
Type
protein
Length
650 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q57968, Q58261
Ligands
QRE

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein299—Q57968
C, D—protein26—Q58261

Ligands and binding sites

  • QRE · 2-[3,6-bis(oxidanyl)-9~{H}-xanthen-9-yl]-5-[(6-oxidanyl-6-oxidanylidene-hexyl) carbamothioylamino]benzoic acid · ligand · 2 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ZW0 · Connectase MJ0548 from Methanocaldococcus jannaschii in complex with an MtrA-derived… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q57968 · AlphaFold monomer V2.0 prediction for uncharacterized protein MJ0548 (Q57968) · a predicted model of the same protein · chain A against A, TM-score 0.89
  • Q58261 · AlphaFold monomer V2.0 prediction for tetrahydromethanopterin S-methyltransferase subunit… · a predicted model of the same protein · chain C against A, TM-score 0.32

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