MolNFT v1 · #172167 · protein
Crystal structure of a cyclodipeptide synthase from bacillus thermoamylovorans
6ZTU · Cyclodipeptide synthase, btcdps: “Crystal structure of a cyclodipeptide synthase from bacillus thermoamylovorans”. X-ray diffraction, 1 ligand (0RE), 1 pocket (best druggability 0.70). MolNFT v1 #172167 on GenesisL1: 3D structure…
- PDB
- 6ZTU
- Type
- protein
- Length
- 230 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyclodipeptide synthase, btcdps
- UniProt
- A0A090KS30
- Ligands
- 0RE
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 56% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyclodipeptide synthase, btcdps | protein | 230 | 56% helix, 13% strand | A0A090KS30 |
Ligands and binding sites
- 0RE · (2S)-hexane-1,2-diol · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.70 | 0.85 | 33 | 0RE |
Compared structures
- 6ZTU · Crystal structure of a cyclodipeptide synthase from Bacillus thermoamylovorans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A090KS30
- Elsewhere: RCSB PDB 6ZTU · PDBe 6ZTU · UniProt A0A090KS30
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