MolNFT v1 · #172139 · protein

Structure of crocagin biosynthetic protein cgne

6ZSU: “Structure of crocagin biosynthetic protein cgne”. X-ray diffraction, 4 pockets (best druggability 0.79). MolNFT v1 #172139 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ZSU
Type: protein
Length: 612 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cgne
UniProt: A0A0K1ECI7
Pockets: 4 · best druggability 0.79

Structure

x-ray diffraction · 2 distinct chains · 29% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cgne	protein	305	29% helix, 29% strand	A0A0K1ECI7
B	Cgne	protein	307	29% helix, 30% strand	A0A0K1ECI7

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1150	0.79	0.81	80	empty
2	254	0.52	0.76	37	empty
3	71	0.32	0.75	15	empty
4	66	0.31	0.75	16	empty

Interfaces

1 interface between chains.

A–B · 758 Å² buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 14 modified (engineered).

Compared structures

6ZSU · Structure of crocagin biosynthetic protein CgnE · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0K1ECI7
Elsewhere: RCSB PDB 6ZSU · PDBe 6ZSU · UniProt A0A0K1ECI7

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