MolNFT v1 · #172081 · protein
Structure of the PMT2-mir domain with bound ligands
6ZQP · PMT2 isoform 1: “Structure of the PMT2-mir domain with bound ligands”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #172081 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZQP
- Type
- protein
- Length
- 193 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PMT2 isoform 1
- UniProt
- A0A6A5PTF1
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PMT2 isoform 1 | protein | 193 | 6% helix, 44% strand | A0A6A5PTF1 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 4 copies · chains A
- GOL · Glycerol · additive · 3 copies · chains A
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6ZQP · Structure of the Pmt2-MIR domain with bound ligands · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A6A5PTF1
- Elsewhere: RCSB PDB 6ZQP · PDBe 6ZQP · UniProt A0A6A5PTF1
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